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INC 2008 Publications

Akalin Acar, Z., Makeig, S. (2008, August). Neuroelectromagnetic forward modeling toolbox. Proceedings of IEEE EMBC, Vancouver, Canada.

Ataseven,Y., Akalin Acar, Z., Acar, C.E., Gencer, N.G. (2008). Parallel implementation of the accelerated BEM approach for EMSI of the human brain. Med. & Biol. Eng. & Comp.

Bartlett, M. Littlewort, G. Vural, E., Lee, K., Cetin, M., Ercil, A., & Movellan, M. (2008). Data mining spontaneous facial behavior with automatic expression coding. Lecture Notes in Computer Science 5042, p. 1-21.

Bigdely-Shamlo, N., Vankov, A., Ramirez, R.R., Makeig, S. (2008) Brain activity-based image classification from rapid serial visual presentation. IEEE Trans Neural Syst Rehabil Eng.

Butko, N.J., Zhang, L. Cottrell, G.W., & Movellan, J.R. (2008) Visual saliency model for robot cameras. In International Conference on Robotics and Automation (ICRA) 2008.

Butko, N. & Movellan, J.R. (2008). I-POMDP: An Infomax Model of Eye Movement, Proceedings of the 2008 IEEE International Conference on Development and Learning (ICDL), August 9-12.

Chen, E., Stiefel, K.M., Sejnowski, T.J., & Bullock, T.H. Model of traveling waves in a coral nerve network, Journal of Comparative Physiology A, 194(2):195-200 (2008).

Cockburn, J., Bartlett, M., Tanaka, J. Movellan, J., & Schultz, R. (2008). SmileMaze: A tutoring system in real-time facial expression perception and production in children with Autism Spectrum Disorder, Proceedings from the IEEE International Conference on Automatic Face & Gesture Recognition (peer-reviewed conference proceeding), 978-986.

Delorme A., Sejnowski T.J., & Makeig S. (2008). Improved rejection of artifacts from EEG data using high-order statistics and independent component analysis. NeuroImage.

Englitz, B., Stiefel, K.M., & Sejnowski, T.J., Irregular firing of isolated cortical interneurons in vitro driven by intrinsic stochastic mechanisms, Neural Computation, 20(1): 44-64 (2008).

Finelli, L.A., Haney, S., Bazhenov, M., Stopfer, M., & Sejnowski, T.J., Synaptic learning rules and sparse coding in a model sensory system, PLoS Comput Biol, 4 (4): e1000062. doi:10.1371/journal.pcbi.1000062, (2008).

Fishman, I., Goldman, M., & Donchin, E. (2008). P300 as a neurophysiological probe of alcohol expectancy processes. Experimental and Clinical Psychopharmacology, 16 (4), 341-356. PMID: 18729689

Frohlich, F., Bazhenov, M., & Sejnowski, T.J., Pathological effect of homeostatic synaptic scaling on network dynamics in diseases of the cortex. Journal of Neuroscience, 28(7): 1709-1920, (2008).

Frohlich, F., Bazhenov, M., Iragui-Madoz, V., & Sejnowski, T.J. Potassium dynamics in the epileptic cortex: New insights on an old topic. The Neuroscientist 14 (5):422?433, (2008).

Groppe, D., Makeig, S., & Kutas, M. (2009). Identifying Reliable Independent Components via Split-Half Comparisons (0.8MB pdf) NeuroImage, http://dx.doi.org/10.1016/j.neuroimage.2008.12.038

Hammon, P.S., Makeig, S., Poizner, H., Todorov, E., & de Sa, V. (2008). Extracting trajectories and target endpoints from human EEG during a reaching task, IEEE Signal Processing, 25, 69-77.

Huang, R.-S., Jung, T.-P., Delorme, A., & Makeig, S. (2008). Tonic and phasic electroencephalographic dynamics during continuous compensatory tracking. Neuroimage.

Huang, R.-S., Jung, T.-P., Delorme, A., & Makeig, S. (2008). The engaging and disengaging brain: Event-related electroencephalographic dynamics in a continuous compensatory tracking task. NeuroImage.

Ho, T.J., Duann, J.R., Chen, C.M., Chen, J.H., Shen, W.C., Lu, T.W., et al. (2008). Carryover effects alter FMRI statistical analysis in an acupuncture study. The American Journal of Chinese Medicine.

Keller, D.X., Franks, K.M., Bartol, T.M., & Sejnowski, T.J. Calmodulin activation by calcium transients in the postsynaptic density of dendritic spines, PLoS ONE 3(4): e2045. doi:10.1371/. PMCID: PMC2312328, (2008).

Kerr, R.A., Bartol, T.M., Kaminsky, B., Dittrich, M., Chang, J.-C. J., Baden, S., Sejnowski, T.J., & Stiles, J.R. Fast Monte Carlo simulation methods for biological reaction-diffusion systems in solution and on surfaces, SIAM Journal on Scientific Computing, 30(6) 3126-3149 (2008).

Krebs, H., Dipietro, L., Levy-Tzedek, S., Fasoli, S., Rykman, A., Zipse, J., Fawcett, J., Stein, J., Poizner, H., Lo, A., Volpe, B., & Hogan, N. (2008). A Paradigm-Shift: Therapeutic NeuRobotics, IEEE Engineering in Medicine and Biology, 27(4): 61-70.

Lew, S., Wolters, C.H., Anwer, A., Makeig, S., Macleod, R.S. (2008). Improved EEG source analysis using low-resolution conductivity estimation in a four-compartment finite element head model. Human Brain Mapping.

Lin, C.T., Li-Wei, K., Chiou, J.C., Duann, J.R., Huang, R.S., Liang, S.F., et al. (2008). Noninvasive Neural Prostheses Using Mobile Wireless EEG. Proceedings of the IEEE.

D.N.Loizos, P.P.Sotiriadis, and G. Cauwenberghs, "A Translinear SiGe BiCMOS Current-Controlled Oscillator with 80 Hz-800MHz Tuning Range", Analog Integrated Circuits and Signal Processing, vol. 57(1-2), pp.107-115, 2008.

Lopreore, C.L., Bartol, T.M., Coggan, J.S., Keller, D.X., Sosinsky, G.E., Ellisman, M.H., & Sejnowski, T.J. Computational modeling of 3D electrodiffusion in biological systems: Application to the node of Ranvier, Biophysical Journal 95(6): 2624-2635, (2008).

Low, P.S., Shank, S.S., Sejnowski, T.J., & Margoliash, D. Mammalian-like features of sleep structure in zebra finches. Proceedings of the National Academy of Sciences U.S.A., 105(26): 9081-9086 (2008).

Morency, L.P., Whitehill, J., & Movellan, J.R. (2008). Generalized Adaptive View-based Appearance Model: Integrated Framework for Monocular Head Pose Estimation. Face and Gesture Recognition.

Palmer, J.A., Makeig, S., Kreutz-Delgado, K., Rao, B.D. (2008, April). Newton method for the ICA mixture model. in the Proceedings of the 33rd IEEE International Conference on Acoustics and Signal Processing (ICASSP 2008), Las Vegas, NV.

Pitts, M., Gavin, W., & Nerger, J. (2008 June). Early top-down influences on bistable perception revealed by event-related potentials. Brain and Cognition, 67(1), 11-24. PMID: 18155339.

Prescott, S.A., De Konick, Y., & Sejnowski, T.J. Biophysical Basis for Three Distinct Dynamical Mechanisms of Action Potential Initiation. PLoS Computational Biology 4(10): e1000198 (2008).

Prescott, S.A., Ratte, S., De Konick, Y., & Sejnowski, T.J. Pyramidal neurons switch from integrators in vitro to resonators under in vivo-like conditions. Journal of. Neurophysiology 100: 3030-3042 (2008).

Prescott, S.A. & Sejnowski, T.J. Spike-rate coding and spike-time coding are affected oppositely by different adaptation mechanisms, Journal of Neuroscience 28 (50):13649 ?13661 (2008).

Sejnowski, T.J., Bazhenov, M., Timofeev, I., & Frohlich, F. Cellular and network mechanisms of electrographic seizures, Drug Discovery Today: Disease Models 5 (1): 45-57 (2008).

Seubert, J., Humphreys, G.W., M?ller, H.J., Gramann, K. (2008). Straight after the turn: The role of the parietal lobes in egocentric space processing. Neurocase.

Stiefel K.M., Gutkin B.S., & Sejnowski T.J. Cholinergic neuromodulation changes phase response curve shape and type in cortical pyramidal neurons. PLoS ONE. 3(12):e3947. Epub (2008).

Tiesinga, P., Fellous, J.M., & Sejnowski, T.J. Regulation of spike timing in visual cortical circuits. Nature Review of Neuroscience, 9: 97-109 (2008).

Toellner,T., Gramann, K., Mu?ller, H.J., Kiss, M., Eimer, M. (2008) Electrophysiological Markers of Visual Dimension Changes Response Changes. Journal of Experimental Psychology.

Zhu, Y., Shayan, A., Zhang, W., Chen, T.L., Jung, T.P., Duann, J.R., Makeig, S., Cheng, C.K. (2008). Analyzing high-density ECG signals using ICA. IEEE Trans Biomed Eng.

 

 

Conference Papers / Proceedings

 

Akalin Acar, Z., Worrell, G., Makeig, S., Palmer, J. (2008, July). Cortical source localization using multiscale EEG data. Paper presented at the Annual Sloan-Swartz Meeting, Princeton, NJ.

Bartlett, M.S. (2008). Automated expression coding of spontaneous human behavior. Computational and Systems Neuroscience (COSYNE) Workshop on Dynamic Faces: From experiments to novel computational neural theories Snowbird, UT, March.

Bartlett, M.S., Littlewort-Ford, G.C., & Movellan, J.R. (2008). Computer Expression Recognition Toolbox. Demo: 8th Intl IEEE Conference on Automatic Face and Gesture Recognition. Amsterdam, Netherlands.

Burdge, B., Bigdely, N., Onton, J., & Makeig, S. (2008, October 7). Independent source clustering for EEG analysis. Presented at the Bernstein Centers Meeting.

Y.M. Chi, R. Etienne-Cummings, and G. Cauwenberghs, "Image Sensor with Focal Plane Change Event Driven Video Compression", Proc. IEEE Int. Symp. Circuits and Systems (ISCAS'2008), Seattle WA, May 18-21, 2008.

Chukoskie, L., Sejnowski, T., Song, D., Albright, T., & Poizner, H. Implicit learning of eye movement search in Parkinson's Disease. Program Number 639.17, 2008 Abstract Viewer/Itinerary Planner. Washington, D.C: Society for Neuroscience.

Delorme, A. & Makeig, S. (2008, November 30-December 2). Open source programming for interpreted language: Bridging between graphic interface macro scripting. 2008 IEEE International Conference on Signal Image Technology Internet Based Systems, Denpasar, Indonesia.

Duann, J.R. (2008, August 28). Exploring BOLD-based causality between Independent brain networks. 5th Annual World Congress of International Brain Mapping and Intraoperative Surgical Planning Society (IBMISPS), Los Angeles, CA.

Gramann, K., Vankov, A., Bigdely-Shamlo, N., & Makeig, S. (2008). Mobile brain/body dynamics (MoBI): Brain and neck muscle dynamics during orienting towards learned object locations, Washington, D.C: Society for Neuroscience.

Lainscsek, C., Rowat, P.F., Schettino, L., Song, D.D., & Poizner, H. Nonlinear temporal dynamics of repetitive hand movements in Parkinson's disease: Improved results using genetic search of nonlinear DDE models. Program Number 639.22, 2008 Abstract Viewer/Itinerary Planner. Washington, D.C: Society for Neuroscience.

D.N. Loizos, P.P. Sotiriadis, and G. Cauwenberghs, "Adaptive Delay Compensation in Multi-Dithering Adaptive Control", Proc. IEEE Int. Symp. Circuits and Systems (ISCAS'2008), Seattle WA, May 18-21, 2008.

D.N. Loizos, P.P. Sotiriadis, and G. Cauwenberghs, "A 7-decades Tunable Translinear SiGe BiCMOS 3-phase Sinusoidal Oscillator", Proc. IEEE Int. Symp. Circuits and Systems (ISCAS'2008), Seattle WA, May 18-21, 2008.

D.N. Loizos, P.P. Sotiriadis, and G. Cauwenberghs, "High-Speed Adaptive RF Phased Array", Proc. IEEE Int. Symp. Circuits and Systems (ISCAS'2008), Seattle WA, May 18-21, 2008.

Makeig, S. (2008, July). Multiscale electrophysiology: Modeling large-scale and neural-scale dynamics in multi-resolution human data. Sloan-Swartz Meeting Princeton, NJ.

Makeig, S. (2008, July 28). Mobile brain/body imaging. Paper presented at University of California, Santa Barbara.Makeig, S. (2008, August 13). Testing the twenty-year rule: ICA and biomedical signals. Sejnowski Festschrift, Salk Institute, La Jolla, CA.

Makeig, S. (2008, September 11). Linking mind, brain, and behavior: New perspectives in psychophysiology. Invited keynote address International Congress of Psychophysiology, St. Petersburg, Russia.

Makeig S. (2008, September 27). Measuring Aha! Insights on insight. Invited talk Swartz Foundation Workshop, Rancho Santa Fe, CA.

M. Mollazadeh, K. Murari, H. Schwerdt, X. Wang, N. Thakor, and G. Cauwenberghs, "Wireless Multichannel Acquisition of Neuropotentials", IEEE Proc. Biomedical Circuits and Systems Conf. (BioCAS'2008), Baltimore MD, Nov. 20-22, 2008.

M. Mollazadeh, K. Murari, G. Cauwenberghs, and N. Thakor, "From Spikes to EEG: Integrated Multichannel and Selective Acquisition of Neuropotentials", IEEE Eng. Med. Biol. Conf. (EMBC'2008), Vancouver Canada, August 20-24, 2008.

K. Murari, M. Mollazadeh, N. Thakor, and G. Cauwenberghs, "Simultaneous Wireless Electrophysiological and Neurochemical Monitoring", SPIE Biosensing II (OP106), vol. 7035, 70350Q, San Diego CA, Aug. 12-14, 2008.

Onton, J. & Makeig. S. (2008). Temporal relationships between independent EEG frequency modulations COSYNE, Salt Lake City, UT, March.

Onton, J. (2008, September 15). Independent components analysis of EEG/MEG data: Theory and application. Invited talk at UK Summer School was sponsored by: Wales Institute of Cognitive Neuroscience (WICN) Bangor, Wales.

Palmer, J., Makeig, S., Kreutz-Delgado, K., & Rao, B.D. (2008). Newton method for the ICA mixture model, ICASSP.

Palmer, J.A., Kreutz-Delgado, K., Makeig, S. (2008, July 7). Sparse independent vector analysis: Dictionary design using a fast ICA/IVA mixture model. 2008 SIAM Conference on Imaging Science, San Diego, CA.

Peterson, D.A., Elliott, C., Song, D.D., Makeig, S., Sejnowski, T.J., & Poizner, H. (2008). Dopamine deficiency in Parkinson's disease compromises adaptations in rewarded learning, Presentation at the Movement Disorder Society's 12th International Conference on Parkinson's Disease and Movement Disorders, Chicago, IL.

Peterson, D.A., Lotz, D., Elliott, C., Makeig, S., Sejnowski, T.J., Poizner, H. (2008). Alpha desynchronization reflects prediction error in rewarded learning, Program Number 680.8, 2008 Abstract Viewer/Itinerary Planner, Society for Neuroscience, Washington, DC.

Ruvolo, P., Bartlett, M.S., Butko, N., Lainscsek, C., Littlewort, G., Whitehill, J., Wu, T., & Movellan, J. (2008). Machine perception for human machine interaction. Demo: Neural Information Processing Systems (NIPS*08).

T.J. Sullivan, S.R. Deiss, T.-P. Jung, and G. Cauwenberghs, "A Brain-Machine Interface using Dry-Contact, Low-Noise EEG Sensors", Proc. IEEE Int. Symp. Circuits and Systems (ISCAS'2008), Seattle WA, May 18-21, 2008.

Tanaka, J., Movellan, J., Bartlett, M., Cockburn, J., & Pierce, M. (2008). SmileMaze: A real-time program training in expression recognition. Demo, 8th Annual Meeting of Vision Science Society, Naples, FL, April.

Whitehill, J., Bartlett, M., & Movellan, J. (2008). Measuring the perceived difficulty of a lecture using automatic facial expression recognition. Intelligent tutoring systems. Montreal, Canada, June.

 

 

Web Publications

 

Stiefel K.M., Gutkin B.S., & Sejnowski T.J. Cholinergic neuromodulation changes phase response curve shape and type in cortical pyramidal neurons. PLoS ONE. 3(12):e3947. Epub (2008).

 

 

Books/Book Chapters

 

 

Bazhenov, M., Houweling, A., Timofeev, I., & Sejnowski, T.J. Homeostatic plasticity and post-traumatic epileptogenesis, In: Homeostatic Plasticity and Postraumatic Epileptogenesis, edited by I. Soltesz and K. Staley, Elsevier, 253-271, (2008).

Bigdely-Shamlo, N., Vankov, A., Ramirez, R.R., & Makeig S. Brain activity-based image classification from rapid serial visual presentation. (8.3 MB pdf) IEEE Transactions on Neural Systems and Rehabilitation Engineering, 16(4): 432-441, 2008

Delac, K., Grgic, M., & Bartlett, Eds. (2008). Face Recognition - State of the Art in Cognitive and Computational Processes. I-Tech Education and Publishing, Vienna, EU.

Fr?hlich, F., Timofeev, I., & Sejnowski, T.J., Bazhenov, M., Extracellular potassium dynamics and epileptogenesis, In: Homeostatic Plasticity and Postraumatic Epileptogenesis, edited by I. Soltesz and K. Staley, Elsevier, 407-427, (2008)

Makeig, S. Introductory remarks, book on music and brain, Stanford, 2008.

Moldakarimov, S. & Sejnowski, T.J. Neural Computation Theories of Learning. In: Learning and Memory: A Comprehensive Reference, edited by J. Byrne, Elsevier, Oxford Vol. 4, 667-680 (2008).

Muller, M., Onton, J., Makeig, S., & Gramann, K. (2008). Human brain dynamics accompanying path integration - the impact of path complexity. In: P. Khader, K. Jost, H. Lachnit, & F. Raesler (eds.), Beitraege zur 50. Tagung experimentell arbeitender Psychologen, Pabst Science Publishers: Berlin.

 

Other

 

Akalin Acar, Z., Makeig, S., & Worrell, G. Head modeling cortical source localization in epilepsy. 30th Ann Int Conf IEEE Engineer Med Biol Soc, 2008. EMBS 2008, Vancouver, BC. pp. 3763-3766. 2008

Bonjean, M., Low, P., Wylie, L., Nielsen, B., Sejnowski, T.J., & Gage, F.H., Noninvasive EEG in Animals, Society for Neuroscience Abstracts, (2008).

Brown, G.D., Yamada, S., Nakashima, M., Moore-Kochlacs, C., Sejnowski, T. J.; Independent Component Analysis of Optical Recordings from Tritonia Swimming Neurons, Institute for Neural Computation, UCSD Technical Report, INC-08-001, (October, 2008).

Chukoskie, L., Albright, T.D., Song, D.D., Sejnowski, T.J., & Poizner, H. Implicit Learning of Eye Movement Search in Parkinson's Disease, Society for Neuroscience Abstracts, (2008).

Frost, W.N., Moore-Kochlacs, C., Hill, E.S., Wang, J., & Sejnowski, T.J., Simultaneous Intracellular And Optical Recordings Confirm Blind Separation Of Single Neurons By Independent Component Analysis, Society for Neuroscience Abstracts, (2008).

Lainscek, C., Rowat, P., Schettino, L., Song, D.D., & Poizner, H. Nonlinear temporal dynamics of repetitive hand movements in Parkinson's disease: Improved results using genetic search of nonlinear DDE models. Abstract 639.22, Society for Neuroscience Annual Meeting 2008, Washington DC.

Low, P.S., Barton, S.C., Landreth, R., & Sejnowski, T.J. R.E.M. Revealed, Society for Neuroscience Abstracts, (2008).

Moldakarimov, S.B., Bazhenov, M.V., & Sejnowski, T.J. Roles of Feedforward, Recurrent and Feedback Connections in Reliable Visual Processing, Society for Neuroscience Abstracts, (2008).

Nadkarni, S., Bartol, Jr, T.M., Sejnowski, T.J. & Levine, H. Presynaptic Calcium Dynamics and Geometrical Constraints on Plasticity in A Hippocampal Synapse, Society for Neuroscience Abstracts, (2008).

Ohayon, E.L., Burnham, W.M., Kwan, H.C., Sejnowski, T.J., & Bazhenov, M. Heterogeneity and Asymmetry in Neural Network Structure can Effect Non-Evoked Transitions in Population Activity. Society for Neuroscience Abstracts, Washington DC, November (2008) 436.10

Peterson, D.A., Elliott, C., Song, D.D., Makeig, S., Sejnowski, T.J., & Poizner, H. Dopamine Deficiency in Parkinson's Disease Compromises Adaptations in Reward Learning, Movement Disorders Supplement 23 (1) S105-S105 (2008).

Peterson, D.A., Lotz, D.T., Elliott, C., Makeig, S., Sejnowski, T.J., & Poizner, H. Alpha Desynchronization Reflects Prediction Error in Rewarded Learning, Society for Neuroscience Abstracts, (2008).

Peterson, D.A., Elliott, C., Song, D.D., Makeig, S., Sejnowski, T.J., & Poizner, H. Dopamine deficiency in Parkinson's disease compromises adaptations in rewarded learning. Movement Disorders 23:S105-S105 (2008).

Prescott, S.A..,Ratt?, S., De Koninck, Y., & Sejnowski, T.J. How pyramidal neurons switch from integrators in vitro to resonators under in vivo-like conditions, Society for Neuroscience Abstracts, (2008).

Ruvolo, P. & Movellan, J.R. (2008). Automatic Cry Detection in Early Childhood Education Settings. International Conference on Development and Learning.

Ruvolo, P., Whitehill, J., Virnes, M., & Movellan, J.R. (2008). Building a More Effective Teaching Robot Using Apprenticeship Learning. International Conference on Development and Learning.

Ruvolo, P., Fasel, I., & Movellan, J.R. (2008). Auditory Mood Detection for Social and Educational Robots. IEEE International Conference on Robotics and Automation.

Toups, J.V., Fellous, J.-M., Sejnowski, T.J., & Tiesinga, P.H. Heuristics for Revealing the Event Structure of Neuronal Spike Trains, Society for Neuroscience Abstracts, (2008).

Vural, E., Cetin, M., Ercil, A., Littlewort, G., Bartlett, M., & Movellan, J. (2008). Automated Drowsiness Detection For Improved Driving Safety. Proc. 4th international conference on automotive technologies. Istanbul.

Whitehill, J., Bartlett, M., & Movellan, J. (2008). Automated teacher feedback using facial expression recognition. Workshop on CVPR for Human Communicative Behavior Analysis, IEEE Conference on Computer Vision and Pattern Recognition.

Whitehill, J. & Movellan, J.R. A Discriminative Approach to Frame-by-Frame Head Pose Tracking. Face and Gesture Recognition 2008.

 

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Faculty Spotlight

Tzyy-Ping Jung
Elevated to IEEE Fellow for contributions to blind source separation for biomedical applications.

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Staff Spotlight

Lily Marapao, Human Resource Manager, is retiring from UCSD after 31 years

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